STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14907.1ABC transporter, ATP-binding protein, MDR family protein. (584 aa)    
Predicted Functional Partners:
EAR14766.1
ABC transporter, ATP-binding protein, MsbA family protein.
  
  
 
0.922
EAR15935.1
ABC transporter ATP-binding protein.
     
0.807
EAR14906.1
Hypothetical protein.
       0.668
EAR14908.1
NusB family protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
    0.657
EAR16881.1
HlyB/MsbA family ABC transporter.
  
 
0.651
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.543
EAR14104.1
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.523
EAR14909.1
Hypothetical protein.
       0.522
EAR14895.1
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.519
EAR14910.1
YajC.
       0.491
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.