STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14953.1Possible gluconolactonase precursor. (302 aa)    
Predicted Functional Partners:
EAR16615.1
Quinate/shikimate dehydrogenase, putative.
  
  
 0.930
EAR16624.1
Gluconolactonase precursor.
  
  
 
0.927
EAR14605.1
Dehydrogenase.
 
 
  0.925
EAR15162.1
Gluconolactonase (precursor).
  
  
 
0.923
EAR14954.1
N-acyl-D-amino-acid deacylase.
      0.915
EAR15841.1
Putative gluconokinase.
    
 0.906
EAR15163.1
Hypothetical protein.
    
  0.900
EAR14952.1
Probable endo-1,4-beta-xylanase B.
  
    0.559
EAR14955.1
MazG family protein.
       0.548
EAR14951.1
Hypothetical protein.
       0.542
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.