STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14964.1Putative aldose 1-epimerase. (301 aa)    
Predicted Functional Partners:
EAR17135.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.915
EAR14728.1
ROK family protein.
  
 
 0.912
EAR15862.1
Putative haloacid dehalogenase-type hydrolase.
   
 
  0.901
EAR16010.1
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.581
EAR14965.1
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.541
EAR14962.1
Arginine/ornithine transport system ATPase.
       0.503
EAR14963.1
Hypothetical protein.
       0.494
EAR14966.1
Hypothetical protein.
       0.462
EAR14967.1
Hypothetical protein.
       0.462
EAR14960.1
Hypothetical protein.
       0.412
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.