STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14979.1Amidohydrolase family enzyme. (518 aa)    
Predicted Functional Partners:
EAR15782.1
Xaa-Pro aminopeptidase family enzyme.
 
     0.719
EAR14980.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain.
 
     0.700
EAR15730.1
Serine carboxypeptidase.
 
     0.622
EAR17193.1
Hypothetical protein.
  
     0.593
EAR15761.1
Predicted extracellular metal-dependent peptidase.
  
     0.579
EAR16049.1
Histidine ammonia-lyase.
  
  
 0.539
EAR17194.1
Putative outer membrane protein probably involved in nutrient binding.
  
     0.521
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.488
EAR17075.1
Hypothetical protein.
  
  
 0.488
EAR17246.1
Putative secreted protein.
  
     0.454
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.