STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnyHypothetical protein; Endoribonuclease that initiates mRNA decay. (522 aa)    
Predicted Functional Partners:
EAR16516.1
Hypothetical protein.
 
  
 0.765
EAR15006.1
Hypothetical protein.
       0.511
EAR14102.1
Hypothetical protein.
 
   
 0.507
EAR14367.1
Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase.
 
     0.473
EAR15005.1
Hypothetical protein.
       0.455
EAR16715.1
Putative single-stranded-DNA-specific exonuclease.
  
    0.414
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.