STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15138.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
EAR17171.1
Hypothetical protein.
  
     0.631
EAR15139.1
Putative isopenicillin N epimerase.
       0.542
EAR16613.1
Hypothetical protein.
  
     0.533
EAR16768.1
Hypothetical protein.
 
     0.469
EAR14870.1
Hypothetical protein.
  
     0.467
EAR16812.1
Hypothetical protein.
  
     0.459
EAR15964.1
Hypothetical protein.
  
     0.446
EAR15140.1
Hypothetical protein.
 
     0.440
EAR15641.1
Hypothetical protein.
  
     0.440
EAR16870.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.