STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15301.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EAR15300.1
Hypothetical protein.
   
 0.992
EAR15302.1
Hypothetical protein.
     
 0.726
EAR15299.1
Hypothetical protein.
       0.706
EAR14223.1
Hypothetical protein.
  
 
 0.666
EAR15298.1
Putative N-acetylmuramoyl-L-alanine amidase amiA.
       0.547
EAR15303.1
beta-N-acetylglucosaminidase.
       0.530
EAR14397.1
Electron transfer flavoprotein (beta subunit).
 
  
 0.518
EAR15304.1
Glycosyl transferase, group 1 family protein.
 
     0.487
EAR14398.1
Electron transfer flavoprotein, alpha subunit.
 
  
 0.486
EAR14492.1
3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.476
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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