STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15328.1Wlac protein. (296 aa)    
Predicted Functional Partners:
EAR15327.1
Virulence factor MVIN-like protein.
 
     0.842
EAR15325.1
Glycosyltransferase.
     0.669
EAR15337.1
Putative udp-glucuronic acid epimerase.
 
    0.617
EAR15326.1
Hypothetical protein.
  
  
 0.588
EAR15329.1
Wlac protein.
 
    
0.550
EAR15321.1
Putative undecaprenyl-phosphate glycosyl-1-phosphate transferase.
 
  
 0.521
EAR15343.1
Tyrosine-protein kinase.
 
  
 0.504
EAR14404.1
Isoamylase protein-like protein.
   
 0.497
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.497
EAR16560.1
Probable nucleotide sugar dehydrogenase.
 
  
 0.489
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.