STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15590.1Naringenin-chalcone synthase. (352 aa)    
Predicted Functional Partners:
EAR15588.1
FAD dependent oxidoreductase, putative.
 
  
 0.959
EAR15589.1
Hypothetical protein.
 
     0.947
EAR15594.1
Acyl carrier protein.
 
 
 0.932
EAR15593.1
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.881
EAR16677.1
Metallo-beta-lactamase superfamily protein.
    
   0.874
EAR17059.1
Rhodanese-like protein.
    
   0.874
EAR14696.1
Metallo-beta-lactamase superfamily protein.
    
   0.874
EAR15591.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
 
 
 
 0.839
EAR15592.1
(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative.
 
     0.827
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.765
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.