STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15620.1Osmotically inducible protein OsmC. (138 aa)    
Predicted Functional Partners:
EAR14498.1
Trehalose-6-phosphate synthase.
   
    0.819
EAR15664.1
DPS family protein; Belongs to the Dps family.
  
  
 0.592
EAR16153.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.524
EAR16529.1
Oxidoreductase, aldo/keto reductase family protein.
  
  
 0.512
EAR16030.1
Adenylate/guanylate cyclase.
   
    0.495
EAR16934.1
Hypothetical protein.
   
    0.495
EAR15619.1
Hypothetical protein.
       0.486
EAR14529.1
Copper/Zinc superoxide dismutase.
  
  
 0.479
EAR15197.1
Hypothetical protein.
   
  
 0.446
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.