STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15641.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
EAR15197.1
Hypothetical protein.
   
  
 0.900
EAR15640.1
Hypothetical protein.
 
     0.712
EAR15639.1
Hypothetical protein.
       0.645
EAR15642.1
Naphthoate synthase.
       0.572
EAR16351.1
Hypothetical protein.
  
     0.545
EAR16603.1
Hypothetical protein.
  
     0.543
EAR14314.1
Hypothetical protein.
  
     0.495
EAR15733.1
Glycosyl transferase, group 2 family protein.
  
     0.476
EAR17075.1
Hypothetical protein.
  
     0.453
EAR17026.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.