STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15653.1Hypothetical protein. (667 aa)    
Predicted Functional Partners:
EAR15651.1
Sulfatase.
 
 
   0.944
EAR15652.1
Glycosyl transferase, group 2 family protein.
 
     0.943
EAR15650.1
Hypothetical protein.
 
     0.919
EAR15654.1
Two-component response regulator.
 
     0.888
EAR15655.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region.
       0.784
EAR16987.1
Hypothetical protein.
  
    0.736
EAR14067.1
Outer membrane autotransporter barrel domain protein.
  
     0.667
EAR16075.1
16S rRNA-processing protein.
 
     0.608
EAR15695.1
Hypothetical protein.
  
     0.596
EAR14167.1
Hypothetical protein.
  
     0.565
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.