STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15662.1Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (294 aa)    
Predicted Functional Partners:
EAR15661.1
Hypothetical protein.
 
 0.997
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.912
EAR17063.1
Transferase hexapeptide repeat protein.
  
 
 0.639
EAR15660.1
Hypothetical protein.
       0.535
EAR17100.1
Glutamate synthase (ferredoxin).
     
 0.519
EAR16783.1
Cys/Met metabolism PLP-dependent enzyme superfamily protein.
 
 
 0.517
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.506
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.502
EAR15403.1
Cystathionine beta-lyase.
 
 
 0.502
EAR15507.1
Cystathionine beta-lyase.
 
 
 0.502
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (40%) [HD]