STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15712.13Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein. (117 aa)    
Predicted Functional Partners:
EAR17234.1
Hypothetical protein.
   
 0.787
EAR14843.1
Hypothetical protein.
   
 0.787
EAR15076.1
Hypothetical protein.
   
 0.787
EAR16829.1
ATP synthase F1, epsilon subunit.
 
 
 0.779
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.741
EAR15594.1
Acyl carrier protein.
   
 0.741
EAR16503.1
Succinate dehydrogenase.
   
 
 0.740
EAR16502.1
Succinate dehydrogenase.
  
 
 0.733
EAR14390.1
Deoxynucleoside kinase subfamily, putative.
   
 0.729
EAR15902.1
Deoxyguanosine kinase/deoxyadenosine kinase subunit.
   
 0.729
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.