STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15734.1Hypothetical protein. (638 aa)    
Predicted Functional Partners:
EAR15736.1
Hypothetical protein.
 
     0.858
EAR15735.1
Dihydroorotase, multifunctional complex type.
  
    0.825
EAR16081.1
Hypothetical protein.
 
  
 0.791
EAR15737.1
Hypothetical protein.
       0.790
EAR15680.1
Hypothetical protein.
 
     0.780
EAR15288.1
Hypothetical protein.
 
     0.778
EAR16228.1
Tetratricopeptide repeat domain protein.
 
     0.775
EAR16593.1
Hypothetical protein.
  
     0.775
EAR15124.1
Hypothetical protein.
  
     0.774
EAR15733.1
Glycosyl transferase, group 2 family protein.
       0.623
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.