STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15814.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
EAR15320.1
Short chain dehydrogenase.
 
 
 0.698
EAR15623.1
NAD dependent epimerase/dehydratase family protein.
 
 
 0.633
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
    0.592
EAR15389.1
Short chain dehydrogenase.
 
 
 0.549
EAR17180.1
Short chain dehydrogenase.
 
 
 0.537
EAR15816.1
Hypothetical protein.
  
    0.477
EAR15018.1
Phytoene dehydrogenase.
    
 0.452
EAR15815.1
Glutamine cyclotransferase.
       0.445
EAR15116.1
Hypothetical protein.
  
   0.422
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.