Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ42655.1Hypothetical protein. (418 aa)    
Predicted Functional Partners:
EAQ42654.1
Hypothetical protein; FOG: WD40 repeat.
 
     0.953
EAQ42653.1
Hypothetical protein.
 
     0.937
mauG
Cytochrome c peroxidase.
 
     0.854
EAQ41055.1
Hypothetical protein.
  
     0.559
EAQ42649.1
Metallo-beta-lactamase superfamily protein; Zn-dependent hydrolases, including glyoxylases.
 
     0.559
purM3
Phosphoribosylaminoimidazole (AIR) synthetase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.547
sufA
Scaffold protein for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
       0.480
sufB
FeS assembly protein SufB; ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.465
EAQ41261.2
Hypothetical protein.
  
     0.433
sufC
FeS assembly ATPase SufC; ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
       0.410
Your Current Organism:
Polaribacter sp. MED152
NCBI taxonomy Id: 313598
Other names: P. sp. MED152, Tenacibaculum sp. MED152
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