Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ42657.1Regulatory protein, LuxR family. (257 aa)    
Predicted Functional Partners:
EAQ40679.1
Hypothetical protein.
  
 
 0.793
EAQ42566.2
Two-component system sensor histidine kinase; FOG: TPR repeat.
 
 
 0.611
EAQ43210.2
Two-component system sensor histidine kinase; Signal transduction histidine kinase.
 
   0.533
EAQ41898.1
Two-component system sensor histidine kinase; Chemotaxis response regulator containing a CheY- like receiver domain and a methylesterase domain.
  
 
 0.515
EAQ42658.1
Hypothetical protein.
       0.465
EAQ40656.2
Two-component system sensor histidine kinase; Signal transduction histidine kinase.
 
   0.439
EAQ41070.1
Heavy metal transporter; Cation transport ATPase.
  
     0.411
Your Current Organism:
Polaribacter sp. MED152
NCBI taxonomy Id: 313598
Other names: P. sp. MED152, Tenacibaculum sp. MED152
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