Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ42666.1Transglycosylase associated protein. (88 aa)    
Predicted Functional Partners:
EAQ41781.1
Hypothetical protein.
   
    0.578
EAQ42667.1
Hypothetical protein.
       0.519
EAQ42665.1
DEAD/DEAH box helicase; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.465
EAQ42442.1
Transcriptional regulator, LytTr family; Response regulator of the LytR/AlgR family.
  
    0.441
EAQ42668.1
Hypothetical protein; RTX toxins and related Ca2+-binding proteins.
       0.427
EAQ43238.1
Transcriptional regulator, LytTr family; FOG: TPR repeat.
  
    0.423
EAQ41639.1
General stress response protein CsbD; Belongs to the UPF0337 (CsbD) family.
  
  
 0.419
Your Current Organism:
Polaribacter sp. MED152
NCBI taxonomy Id: 313598
Other names: P. sp. MED152, Tenacibaculum sp. MED152
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