STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR02035.1Putative lipoprotein. (712 aa)    
Predicted Functional Partners:
EAR02041.1
Hypothetical protein.
    0.827
EAR02034.1
Hypothetical protein.
 
    0.780
EAR02037.1
Hypothetical protein.
 
     0.777
EAR02036.1
Putative endo-beta-galactosidase.
       0.775
EAR02040.1
Hypothetical protein.
 
     0.725
EAR02038.1
Hypothetical protein.
 
    
0.645
EAR02039.1
Putative secreted sulfatase ydeN precursor.
 
    0.629
EAR02045.1
Hypothetical protein.
 
    
0.495
EAR02032.1
BNR repeat protein putative.
  
    0.478
EAR02033.1
Thiol:disulfide interchange protein tlpA.
       0.467
Your Current Organism:
Maribacter sp. HTCC2170
NCBI taxonomy Id: 313603
Other names: Flavobacteriales bacterium HTCC2170, M. sp. HTCC2170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.