STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR02940.1ROK family member transcriptional repressor. (589 aa)    
Predicted Functional Partners:
EAR02945.1
ROK family member transcriptional repressor.
  
 0.988
EAR02944.1
Transcriptional regulator.
 
  
 0.946
EAR02943.1
Hypothetical protein.
 
     0.944
EAR02941.1
Hypothetical protein.
 
   
 0.929
EAR02942.1
Putative alpha-1,2-mannosidase.
 
   
 0.880
EAR02946.1
Putative sugar transport-related, membrane protein.
 
     0.760
EAR02939.1
Nucleoside-diphosphate-sugar epimerase.
  
  
 0.536
EAR02398.1
Alpha-mannosidase.
 
   
 0.521
EAR02947.1
Hypothetical protein.
       0.493
EAR02948.1
phenylalanyl-tRNA synthetase alpha subunit.
       0.493
Your Current Organism:
Maribacter sp. HTCC2170
NCBI taxonomy Id: 313603
Other names: Flavobacteriales bacterium HTCC2170, M. sp. HTCC2170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.