STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ99774.1Ribonuclease G. (515 aa)    
Predicted Functional Partners:
pnp
Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.913
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.758
EAQ99775.1
DNA-binding protein HU; Belongs to the bacterial histone-like protein family.
  
  
 0.591
EAQ99772.1
Putative transcriptional regulatory protein; Modulates RecA activity; Belongs to the RecX family.
 
     0.579
EAR00173.1
Putative polyA polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
 
 
 0.525
EAR01378.1
ATP-dependent RNA helicase, DEAD box family protein.
   
 
 0.515
EAR01584.1
ATP-dependent RNA helicase, DEAD/DEAH box family protein; Belongs to the DEAD box helicase family.
   
 
 0.515
EAR01677.1
DEAD/DEAH box helicase-like protein.
   
 
 0.515
EAR01904.1
Putative 30S ribosomal protein S1.
  
  
 0.490
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
   
 0.483
Your Current Organism:
Maribacter sp. HTCC2170
NCBI taxonomy Id: 313603
Other names: Flavobacteriales bacterium HTCC2170, M. sp. HTCC2170
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