STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR01838.1Putative sulfite reductase. (102 aa)    
Predicted Functional Partners:
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.934
EAR01839.1
Hypothetical protein.
 
   
 0.933
EAR01837.1
Oxidoreductase, putative.
 
   
 0.928
EAR01836.1
Hypothetical protein.
 
     0.667
EAR00428.1
Ferredoxin (flavodoxin) oxidoreductase.
 
 
 
 0.441
EAR02364.1
Polysulphide reductase, NrfD.
 
   
 0.416
EAR01445.1
FAD linked oxidase-like protein.
   
 
 0.412
Your Current Organism:
Maribacter sp. HTCC2170
NCBI taxonomy Id: 313603
Other names: Flavobacteriales bacterium HTCC2170, M. sp. HTCC2170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.