STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_11440Hypothetical protein; Nsp11440; ORF_ID:nsp11440. (469 aa)    
Predicted Functional Partners:
NSP_11460
Iron(III)-transport ATP-binding protein sfuC; Nsp11460; ORF_ID:nsp11460.
 
 0.989
NSP_51650
ABC-type transport system involved in resistance to organic solvents, permease component; Nsp51650; ORF_ID:nsp51650; Belongs to the MlaE permease family.
 
 0.979
NSP_6580
ABC-type transport system involved in resistance to organic solvents, permease component; Nsp6580; ORF_ID:nsp6580; Belongs to the MlaE permease family.
 
 0.977
NSP_32260
Undecaprenyl-phosphate galactosephosphotransferase; Nsp32260; ORF_ID:nsp32260; Belongs to the anti-sigma-factor antagonist family.
  
  0.831
NSP_12830
Anti-sigma F factor antagonist (spoIIAA-2); Nsp12830; ORF_ID:nsp12830.
  
  0.818
NSP_35990
Anti-sigma F factor antagonist (spoIIAA-2); Nsp35990; ORF_ID:nsp35990; Belongs to the anti-sigma-factor antagonist family.
  
  0.818
NSP_39220
Putative anti-sigma factor antagonist; Nsp39220; ORF_ID:nsp39220; Belongs to the anti-sigma-factor antagonist family.
  
  0.818
NSP_6540
Anti-sigma F factor antagonist (spoIIAA-2); Nsp6540; ORF_ID:nsp6540; Belongs to the anti-sigma-factor antagonist family.
  
  0.818
NSP_11140
Hypothetical protein; Nsp11140; ORF_ID:nsp11140.
   
   0.796
NSP_28330
Protein of unknown function DUF490; Nsp28330; ORF_ID:nsp28330.
 
   
 0.762
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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