STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_12110Hypothetical protein; Nsp12110; ORF_ID:nsp12110. (389 aa)    
Predicted Functional Partners:
NSP_47220
Translation elongation factor P; Nsp47220; ORF_ID:nsp47220.
   
 0.866
NSP_13290
WD-40 repeat protein; Nsp13290; ORF_ID:nsp13290.
  
    0.722
NSP_6170
Hypothetical protein; Nsp6170; ORF_ID:nsp6170.
  
     0.617
NSP_8320
Hypothetical protein; Nsp8320; ORF_ID:nsp8320.
  
     0.615
NSP_10090
Hypothetical protein; Nsp10090; ORF_ID:nsp10090.
  
     0.591
NSP_31660
Hypothetical protein; Nsp31660; ORF_ID:nsp31660.
  
     0.590
NSP_12100
DNA-directed RNA polymerase specialized sigma subunit; Nsp12100; ORF_ID:nsp12100.
       0.568
NSP_20580
Hypothetical protein; Nsp20580; ORF_ID:nsp20580.
  
     0.566
NSP_6010
Hypothetical protein; Nsp6010; ORF_ID:nsp6010.
  
 
   0.554
NSP_3380
Transcriptional regulator, TetR family; Nsp3380; ORF_ID:nsp3380.
  
     0.548
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.