STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_12890Hypothetical protein; Nsp12890; ORF_ID:nsp12890. (783 aa)    
Predicted Functional Partners:
NSP_50620
Two-component hybrid sensor and regulator; Nsp50620; ORF_ID:nsp50620.
   
 
  0.731
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
     
 0.712
NSP_31870
Two-component hybrid sensor and regulator; Nsp31870; ORF_ID:nsp31870.
     
 0.627
NSP_39660
Two-component hybrid sensor and regulator; Nsp39660; ORF_ID:nsp39660.
     
 0.627
NSP_4310
Signal transduction histidine kinase CheA; Nsp4310; ORF_ID:nsp4310.
     
 0.627
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.619
NSP_10100
PKD repeat protein; Nsp10100; ORF_ID:nsp10100.
    
   0.596
NSP_13770
Hypothetical protein; Nsp13770; ORF_ID:nsp13770; Belongs to the peptidase S8 family.
    
   0.596
NSP_17790
Hypothetical protein; Nsp17790; ORF_ID:nsp17790.
    
   0.596
NSP_20580
Hypothetical protein; Nsp20580; ORF_ID:nsp20580.
    
   0.596
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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