STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_13520Hypothetical protein; Nsp13520; ORF_ID:nsp13520. (112 aa)    
Predicted Functional Partners:
NSP_13510
ThiJ/PfpI family protein; Nsp13510; ORF_ID:nsp13510.
    
  0.616
NSP_7590
Transcriptional regulator PhnF; Nsp7590; ORF_ID:nsp7590.
  
    0.565
NSP_13500
Hypothetical protein; Nsp13500; ORF_ID:nsp13500.
 
     0.549
NSP_210
Hypothetical protein; Nsp210; ORF_ID:nsp210.
  
     0.542
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 
 0.534
NSP_37890
Hypothetical protein; Nsp37890; ORF_ID:nsp37890.
  
     0.498
NSP_5200
Adenylosuccinate lyase; Nsp5200; ORF_ID:nsp5200; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.496
NSP_23940
Phosphinothricin N-acetyltransferase; Nsp23940; ORF_ID:nsp23940.
    
  0.452
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
    
 0.440
NSP_38770
Hypothetical protein; Nsp38770; ORF_ID:nsp38770.
  
     0.429
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.