STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_14990WD-40 repeat protein; Nsp14990; ORF_ID:nsp14990. (496 aa)    
Predicted Functional Partners:
NSP_26210
Ribulose 1,5-bisphosphate carboxylase/oxygenase activase; Nsp26210; ORF_ID:nsp26210.
    
 0.981
NSP_27030
Ankyrin-like protein; Nsp27030; ORF_ID:nsp27030.
   
 0.975
NSP_36860
Ankyrin; Nsp36860; ORF_ID:nsp36860.
 
 
 0.975
NSP_40940
Ankyrin repeat protein; Nsp40940; ORF_ID:nsp40940.
   
 0.975
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.969
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 0.957
NSP_10340
Hypothetical protein; Nsp10340; ORF_ID:nsp10340.
  
 
  0.943
NSP_23340
Hypothetical protein; Nsp23340; ORF_ID:nsp23340.
  
 
  0.943
NSP_42250
Hypothetical protein; Nsp42250; ORF_ID:nsp42250.
  
 
  0.942
NSP_32510
Hypothetical protein; Nsp32510; ORF_ID:nsp32510.
  
 
  0.941
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.