STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_15770Peptidase S1 and S6, chymotrypsin/Hap; Nsp15770; ORF_ID:nsp15770. (288 aa)    
Predicted Functional Partners:
NSP_26210
Ribulose 1,5-bisphosphate carboxylase/oxygenase activase; Nsp26210; ORF_ID:nsp26210.
  
 
 0.939
NSP_43130
Mov34/MPN/PAD-1; Nsp43130; ORF_ID:nsp43130.
    
  0.761
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 0.745
NSP_15780
Hypothetical protein; Nsp15780; ORF_ID:nsp15780.
   
   0.715
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.696
NSP_27310
Hypothetical protein; Nsp27310; ORF_ID:nsp27310.
  
 
  0.653
NSP_50340
WD40 repeat protein; Nsp50340; ORF_ID:nsp50340.
  
     0.624
NSP_13220
Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain; Nsp13220; ORF_ID:nsp13220.
 
 
   0.619
NSP_39960
Hypothetical protein; Nsp39960; ORF_ID:nsp39960.
  
     0.570
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
 
 
 0.545
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.