STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_15890Permeases of the drug/metabolite transporter (DMT) superfamily; Nsp15890; ORF_ID:nsp15890. (305 aa)    
Predicted Functional Partners:
NSP_48590
Hypothetical protein; Nsp48590; ORF_ID:nsp48590.
  
     0.480
NSP_15880
Acetyltransferase; Nsp15880; ORF_ID:nsp15880.
       0.477
NSP_41480
DNA primase; Nsp41480; ORF_ID:nsp41480.
  
     0.474
NSP_16310
Hypothetical protein; Nsp16310; ORF_ID:nsp16310.
  
     0.466
pheT
Phenylalanyl-tRNA synthetase beta chain; Nsp15080; ORF_ID:nsp15080; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
 
   0.439
NSP_19020
Hypothetical protein; Nsp19020; ORF_ID:nsp19020.
  
  
  0.438
NSP_39040
Hypothetical protein; Nsp39040; ORF_ID:nsp39040.
  
     0.404
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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