STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_15900Hypothetical protein, slr1506/slr1944-like protein; Nsp15900; ORF_ID:nsp15900. (588 aa)    
Predicted Functional Partners:
NSP_33460
Hypothetical protein; Nsp33460; ORF_ID:nsp33460.
  
     0.617
NSP_39960
Hypothetical protein; Nsp39960; ORF_ID:nsp39960.
  
     0.584
NSP_19800
Hypothetical protein; Nsp19800; ORF_ID:nsp19800.
  
     0.576
NSP_44270
Hypothetical protein; Nsp44270; ORF_ID:nsp44270.
  
     0.543
NSP_22620
Hypothetical protein; Nsp22620; ORF_ID:nsp22620.
  
     0.532
truB
tRNA pseudouridine synthase B tRNA Psi55; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.527
NSP_38940
Cyanobacterial hypothetical protein; Nsp38940; ORF_ID:nsp38940.
  
     0.525
NSP_36840
Hypothetical protein; Nsp36840; ORF_ID:nsp36840.
  
     0.500
NSP_53210
Cell division protein Ftn6; Nsp53210; ORF_ID:nsp53210.
 
     0.492
NSP_52270
WD40 repeat protein; Nsp52270; ORF_ID:nsp52270.
  
  
  0.487
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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