Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NSP_160Iron-sulfur cluster assembly protein SufD; Nsp160; ORF_ID:nsp160. (457 aa)    
Predicted Functional Partners:
NSP_170
Iron-sulfur cluster assembly ATPase protein SufC; Nsp170; ORF_ID:nsp170.
 0.999
NSP_150
Cysteine desulfurase, SufS subfamily; Nsp150; ORF_ID:nsp150; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.993
NSP_180
Iron-sulfur cluster assembly protein SufB; Nsp180; ORF_ID:nsp180.
 
  
0.985
NSP_40690
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.948
NSP_21950
Cysteine desulfurase; Nsp21950; ORF_ID:nsp21950.
 
 0.918
NSP_20920
Cysteine desulfurase; Nsp20920; ORF_ID:nsp20920.
 
 
 0.828
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.710
NSP_18080
YrbA protein; Nsp18080; ORF_ID:nsp18080; Belongs to the BolA/IbaG family.
     
 0.688
NSP_18070
Putative monothiol glutaredoxin ycf64-like protein; Nsp18070; ORF_ID:nsp18070; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.685
NSP_50490
Ribonucleotide reductase of class II (coenzyme B12-dependent); Nsp50490; ORF_ID:nsp50490.
   
 
  0.623
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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