STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_16020Methionine ABC transporter ATP-binding protein; Nsp16020; ORF_ID:nsp16020. (199 aa)    
Predicted Functional Partners:
NSP_48830
Cell division protein FtsX; Nsp48830; ORF_ID:nsp48830.
 
  0.974
NSP_16030
DevC protein; Nsp16030; ORF_ID:nsp16030.
 
  0.934
NSP_46590
DevC protein; Nsp46590; ORF_ID:nsp46590.
  
 0.898
NSP_14600
ABC-type antimicrobial peptide transport system, permease component; Nsp14600; ORF_ID:nsp14600.
  
  0.891
NSP_32590
Heterocyst specific ABC-transporter, membrane spanning subunit; Nsp32590; ORF_ID:nsp32590.
  
  0.891
NSP_13700
ABC-type antimicrobial peptide transport system, permease component; Nsp13700; ORF_ID:nsp13700.
  
  0.889
NSP_26810
ABC transporter permease protein; Nsp26810; ORF_ID:nsp26810.
  
 0.889
NSP_46380
ABC transporter permease protein; Nsp46380; ORF_ID:nsp46380.
  
  0.889
NSP_7530
Phosphonates transport ATP-binding protein PhnK; Nsp7530; ORF_ID:nsp7530.
 
    
0.817
NSP_16040
Heterocyst specific ABC-transporter, membrane fusion protein DevB-like protein; Nsp16040; ORF_ID:nsp16040.
 
   0.799
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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