STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_16990Serine/threonine protein kinase; Nsp16990; ORF_ID:nsp16990. (244 aa)    
Predicted Functional Partners:
NSP_2570
Gamma-glutamyltransferase; Nsp2570; ORF_ID:nsp2570.
  
     0.772
NSP_52990
Hypothetical protein; Nsp52990; ORF_ID:nsp52990.
  
     0.772
NSP_29870
Chromosome segregation ATPase; Nsp29870; ORF_ID:nsp29870.
  
     0.770
NSP_29060
Homoserine dehydrogenase; Nsp29060; ORF_ID:nsp29060.
  
     0.768
NSP_35710
DNA segregation ATPase FtsK/SpoIIIE; Nsp35710; ORF_ID:nsp35710.
  
     0.768
NSP_7230
Hypothetical protein; Nsp7230; ORF_ID:nsp7230.
  
     0.765
NSP_43260
Hypothetical protein; Nsp43260; ORF_ID:nsp43260.
  
     0.764
NSP_9180
Chromosome segregation ATPase; Nsp9180; ORF_ID:nsp9180.
  
     0.762
NSP_31480
Putative cyanobacterial membrane protein, in cluster with PxcA; Nsp31480; ORF_ID:nsp31480.
  
     0.761
NSP_47890
Molecular chaperone GrpE (heat shock protein); Nsp47890; ORF_ID:nsp47890.
  
     0.760
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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