STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17210Hypothetical protein; Nsp17210; ORF_ID:nsp17210. (336 aa)    
Predicted Functional Partners:
NSP_31990
Biopolymer transport protein ExbD/TolR; Nsp31990; ORF_ID:nsp31990.
  
 
 0.953
NSP_36030
Biopolymer transport protein ExbD/TolR; Nsp36030; ORF_ID:nsp36030.
  
 
 0.953
NSP_11910
TonB-dependent receptor; Nsp11910; ORF_ID:nsp11910; Outer membrane receptor for ferrienterochelin and colicins.
  
 
 0.923
NSP_2710
Ferrichrome-iron receptor; Nsp2710; ORF_ID:nsp2710.
  
 
 0.923
NSP_15940
Outer membrane vitamin B12 receptor BtuB; Nsp15940; ORF_ID:nsp15940.
   
 
 0.919
NSP_32000
Ferric siderophore transport system, biopolymer transport protein ExbB; Nsp32000; ORF_ID:nsp32000.
  
 
 0.906
NSP_36040
Ferric siderophore transport system, biopolymer transport protein ExbB; Nsp36040; ORF_ID:nsp36040.
  
 
 0.906
NSP_34990
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.853
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.833
NSP_12650
Competence/damage-inducible protein CinA; Nsp12650; ORF_ID:nsp12650; Belongs to the CinA family.
     
 0.797
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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