STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17260Cation-transporting ATPase; Nsp17260; ORF_ID:nsp17260. (1002 aa)    
Predicted Functional Partners:
NSP_47380
ABC-type Fe3+-siderophore transport system, permease component; Nsp47380; ORF_ID:nsp47380.
    
 0.616
NSP_6230
TrkA-N:Sodium/hydrogen exchanger; Nsp6230; ORF_ID:nsp6230; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.616
NSP_44470
Hypothetical protein; Nsp44470; ORF_ID:nsp44470.
 
    0.555
atpE
ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.550
atpE-2
ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.550
NSP_46960
Zn-dependent protease; Nsp46960; ORF_ID:nsp46960; Belongs to the peptidase M50B family.
 
 
  0.524
NSP_1710
Pyruvate kinase; Nsp1710; ORF_ID:nsp1710; Belongs to the pyruvate kinase family.
  
 
 0.513
NSP_7910
Na+/H+ antiporter; Nsp7910; ORF_ID:nsp7910.
 
 
 0.508
NSP_47580
Chloride channel protein; Nsp47580; ORF_ID:nsp47580.
   
 0.501
NSP_34550
Na+/H+-exchanging protein; Nsp34550; ORF_ID:nsp34550.
  
 
 0.499
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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