STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17390Putative membrane protein; Nsp17390; ORF_ID:nsp17390. (418 aa)    
Predicted Functional Partners:
NSP_17400
Zinc finger (C3HC4-type RING finger) family protein; Nsp17400; ORF_ID:nsp17400.
 
    
0.778
NSP_21210
Putative heterocyst to vegetative cell connection protein (fraH); Nsp21210; ORF_ID:nsp21210.
  
   
 0.769
NSP_50480
Hypothetical protein; Nsp50480; ORF_ID:nsp50480.
  
     0.618
NSP_46680
Hypothetical protein; Nsp46680; ORF_ID:nsp46680.
  
     0.575
NSP_21980
Hypothetical protein; Nsp21980; ORF_ID:nsp21980.
  
     0.569
NSP_17380
Hypothetical protein; Nsp17380; ORF_ID:nsp17380.
       0.553
NSP_53500
Amino acid transporter; Nsp53500; ORF_ID:nsp53500.
  
     0.528
NSP_29310
2-methyl-6-phytyl-1,4-benzoquinone cyclase; Nsp29310; ORF_ID:nsp29310.
  
     0.508
NSP_37820
WD40 repeat protein; Nsp37820; ORF_ID:nsp37820.
  
     0.495
NSP_12560
Conserved membrane protein; Nsp12560; ORF_ID:nsp12560.
  
     0.492
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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