STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_1750Glycosyltransferase; Nsp1750; ORF_ID:nsp1750. (284 aa)    
Predicted Functional Partners:
NSP_1770
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.894
NSP_1760
Glucose-1-phosphate thymidylyltransferase; Nsp1760; ORF_ID:nsp1760.
 
  
 0.870
NSP_1790
dTDP-rhamnosyl transferase RfbF; Nsp1790; ORF_ID:nsp1790.
 
     0.847
NSP_1780
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.843
NSP_1800
Hypothetical protein; Nsp1800; ORF_ID:nsp1800.
    
  0.642
NSP_1820
ABC transporter, ATP-binding protein; Nsp1820; ORF_ID:nsp1820.
 
    0.539
NSP_1830
O-antigen export system permease protein RfbD; Nsp1830; ORF_ID:nsp1830.
 
    0.531
gmd
GDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.526
NSP_17120
Cell division protein FtsK; Nsp17120; ORF_ID:nsp17120.
  
     0.512
NSP_1730
Glycosyl transferase, group 1; Nsp1730; ORF_ID:nsp1730.
 
    0.508
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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