STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17710Succinoglycan biosynthesis ketolase; Nsp17710; ORF_ID:nsp17710. (287 aa)    
Predicted Functional Partners:
NSP_11360
Hypothetical protein; Nsp11360; ORF_ID:nsp11360.
  
     0.755
NSP_47460
Von Willebrand factor type D domain protein; Nsp47460; ORF_ID:nsp47460.
  
     0.718
NSP_17720
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Nsp17720; ORF_ID:nsp17720.
    
  0.697
NSP_52530
Hypothetical protein; Nsp52530; ORF_ID:nsp52530.
  
     0.671
NSP_2420
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Nsp2420; ORF_ID:nsp2420.
  
     0.609
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
 
 0.575
NSP_52540
Hypothetical protein; Nsp52540; ORF_ID:nsp52540.
  
     0.568
NSP_52580
Signal transduction histidine kinase; Nsp52580; ORF_ID:nsp52580.
  
     0.567
NSP_17700
Hypothetical protein; Nsp17700; ORF_ID:nsp17700.
       0.554
NSP_38230
Hypothetical protein; Nsp38230; ORF_ID:nsp38230.
  
     0.533
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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