STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17900Hypothetical protein; Nsp17900; ORF_ID:nsp17900. (195 aa)    
Predicted Functional Partners:
NSP_42760
Hypothetical protein; Nsp42760; ORF_ID:nsp42760.
  
     0.775
NSP_17890
DNA-directed RNA polymerase omega subunit; Nsp17890; ORF_ID:nsp17890.
     
 0.769
NSP_30850
Hypothetical protein; Nsp30850; ORF_ID:nsp30850.
  
     0.760
NSP_25220
Hypothetical protein; Nsp25220; ORF_ID:nsp25220.
  
     0.719
NSP_12550
Hypothetical protein; Nsp12550; ORF_ID:nsp12550.
  
     0.693
NSP_1350
Hypothetical protein; Nsp1350; ORF_ID:nsp1350.
  
     0.681
NSP_20580
Hypothetical protein; Nsp20580; ORF_ID:nsp20580.
  
     0.681
NSP_8670
Hypothetical protein; Nsp8670; ORF_ID:nsp8670.
  
     0.679
NSP_1120
Hypothetical protein; Nsp1120; ORF_ID:nsp1120.
  
     0.676
NSP_17910
Hypothetical protein; Nsp17910; ORF_ID:nsp17910.
       0.672
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.