STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_17970CsaB protein; Nsp17970; ORF_ID:nsp17970. (340 aa)    
Predicted Functional Partners:
NSP_11730
Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Nsp11730; ORF_ID:nsp11730; Belongs to the glycosyltransferase 26 family.
   
 0.915
NSP_5710
Hypothetical protein; Nsp5710; ORF_ID:nsp5710.
  
     0.774
NSP_53520
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M; Nsp53520; ORF_ID:nsp53520.
 
     0.766
NSP_11820
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M; Nsp11820; ORF_ID:nsp11820.
 
     0.761
NSP_30990
PKD repeat protein; Nsp30990; ORF_ID:nsp30990.
  
     0.761
NSP_7890
Surface layer protein precursor; Nsp7890; ORF_ID:nsp7890.
  
     0.755
NSP_10100
PKD repeat protein; Nsp10100; ORF_ID:nsp10100.
  
     0.749
NSP_2610
Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.702
NSP_2620
Myosin heavy chain; Nsp2620; ORF_ID:nsp2620.
  
     0.669
NSP_49470
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; Nsp49470; ORF_ID:nsp49470.
 
   
 0.667
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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