STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_180Iron-sulfur cluster assembly protein SufB; Nsp180; ORF_ID:nsp180. (377 aa)    
Predicted Functional Partners:
NSP_170
Iron-sulfur cluster assembly ATPase protein SufC; Nsp170; ORF_ID:nsp170.
 
 0.999
NSP_150
Cysteine desulfurase, SufS subfamily; Nsp150; ORF_ID:nsp150; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.994
NSP_21950
Cysteine desulfurase; Nsp21950; ORF_ID:nsp21950.
 
 0.920
NSP_40690
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.916
NSP_20920
Cysteine desulfurase; Nsp20920; ORF_ID:nsp20920.
 
 0.838
NSP_160
Iron-sulfur cluster assembly protein SufD; Nsp160; ORF_ID:nsp160.
 
   
0.774
NSP_3570
Sulfur acceptor protein SufE for iron-sulfur cluster assembly; Nsp3570; ORF_ID:nsp3570.
 
 
 0.671
NSP_10550
Putative iron binding protein from the HesB_IscA_SufA family; Nsp10550; ORF_ID:nsp10550; Belongs to the HesB/IscA family.
  
 
 0.532
NSP_40890
Putative iron binding protein from the HesB_IscA_SufA family; Nsp40890; ORF_ID:nsp40890; Belongs to the HesB/IscA family.
  
 
 0.532
NSP_600
Putative iron binding protein from the HesB_IscA_SufA family; Nsp600; ORF_ID:nsp600; Belongs to the HesB/IscA family.
  
 
 0.532
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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