Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
NSP_18640 | NSP_18650 | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | 0.773 |
NSP_18640 | NSP_18660 | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | 0.536 |
NSP_18640 | NSP_18670 | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | 0.425 |
NSP_18650 | NSP_18640 | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | 0.773 |
NSP_18650 | NSP_18660 | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | 0.536 |
NSP_18650 | NSP_18670 | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | 0.401 |
NSP_18660 | NSP_18640 | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | 0.536 |
NSP_18660 | NSP_18650 | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | 0.536 |
NSP_18660 | NSP_18670 | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | 0.558 |
NSP_18670 | NSP_18640 | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | Putative nucleic acid-binding protein, contains PIN domain; Nsp18640; ORF_ID:nsp18640. | 0.425 |
NSP_18670 | NSP_18650 | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | Hypothetical protein; Nsp18650; ORF_ID:nsp18650. | 0.401 |
NSP_18670 | NSP_18660 | Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670. | fdxN element excision controlling factor protein; Nsp18660; ORF_ID:nsp18660. | 0.558 |