STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_1870Hypothetical protein; Nsp1870; ORF_ID:nsp1870. (63 aa)    
Predicted Functional Partners:
petG
Cytochrome b6-f complex subunit V (PetG); Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
  
 
   0.912
petB
Cytochrome b6-f complex subunit, cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
    
   0.899
petD
Cytochrome b6-f complex subunit IV (PetD); Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
    
   0.899
NSP_6240
Cytochrome b6-f complex subunit, cytochrome b6, putative; Nsp6240; ORF_ID:nsp6240.
    
   0.838
petC
Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron sulfur protein); Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
    
   0.787
petA
Cytochrome b6-f complex subunit, apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
    
   0.787
NSP_31720
Hypothetical protein; Nsp31720; ORF_ID:nsp31720.
  
     0.759
NSP_31220
Superfamily I DNA and RNA helicase; Nsp31220; ORF_ID:nsp31220.
  
     0.755
NSP_32280
Putative membrane protein, specific for cyanobacteria; Nsp32280; ORF_ID:nsp32280.
  
     0.743
NSP_1880
Putative Arsenical pump-driving ATPase; Nsp1880; ORF_ID:nsp1880.
 
     0.739
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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