STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_18740N-acetylmuramoyl-L-alanine amidase; Nsp18740; ORF_ID:nsp18740. (342 aa)    
Predicted Functional Partners:
NSP_51580
Soluble lytic murein transglycosylase precursor; Nsp51580; ORF_ID:nsp51580.
 
  
 0.815
NSP_10210
Hypothetical protein; Nsp10210; ORF_ID:nsp10210.
  
     0.763
NSP_27970
Hypothetical protein; Nsp27970; ORF_ID:nsp27970.
  
     0.763
NSP_10240
Two-component sensor histidine kinase; Nsp10240; ORF_ID:nsp10240.
  
     0.762
NSP_42490
GCN5-like N-acetyltransferase; Nsp42490; ORF_ID:nsp42490.
  
     0.759
NSP_8210
KH domain RNA binding protein YlqC; Nsp8210; ORF_ID:nsp8210.
  
     0.752
NSP_41500
Hypothetical protein; Nsp41500; ORF_ID:nsp41500.
  
 0.742
NSP_53080
Hypothetical protein; Nsp53080; ORF_ID:nsp53080.
  
     0.736
NSP_53210
Cell division protein Ftn6; Nsp53210; ORF_ID:nsp53210.
 
     0.734
NSP_18010
Hypothetical protein; Nsp18010; ORF_ID:nsp18010.
  
     0.732
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.