STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_18770Hypothetical protein; Nsp18770; ORF_ID:nsp18770. (703 aa)    
Predicted Functional Partners:
NSP_25080
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase; Nsp25080; ORF_ID:nsp25080; Belongs to the aldehyde dehydrogenase family.
 
  
 0.946
NSP_10510
Ferredoxin-dependent glutamate synthase; Nsp10510; ORF_ID:nsp10510.
   
 
  0.828
NSP_49610
Agmatinase; Nsp49610; ORF_ID:nsp49610; Belongs to the arginase family.
    
 0.766
NSP_52700
Transglutaminase-like protein; Nsp52700; ORF_ID:nsp52700.
  
     0.748
NSP_21980
Hypothetical protein; Nsp21980; ORF_ID:nsp21980.
 
     0.712
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
     
 0.708
argD
Acetylornithine aminotransferase; Nsp46650; ORF_ID:nsp46650; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.697
NSP_12330
Hypothetical protein; Nsp12330; ORF_ID:nsp12330.
 
     0.677
NSP_2330
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.661
NSP_18760
Permeases of the major facilitator superfamily; Nsp18760; ORF_ID:nsp18760.
       0.657
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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