STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_1880Putative Arsenical pump-driving ATPase; Nsp1880; ORF_ID:nsp1880. (366 aa)    
Predicted Functional Partners:
NSP_15480
Arsenical pump-driving ATPase; Nsp15480; ORF_ID:nsp15480.
  
   
 0.788
NSP_1870
Hypothetical protein; Nsp1870; ORF_ID:nsp1870.
 
     0.739
NSP_33540
Arsenical-resistance protein ACR3; Nsp33540; ORF_ID:nsp33540.
     
 0.691
NSP_19900
Hypothetical protein; Nsp19900; ORF_ID:nsp19900.
  
     0.677
NSP_45720
Hypothetical protein; Nsp45720; ORF_ID:nsp45720.
  
     0.671
NSP_27380
Nsp27380; ORF_ID:nsp27380.
  
 
   0.664
NSP_41360
Nitrogenase-associated protein NifO; Nsp41360; ORF_ID:nsp41360; Belongs to the ArsC family.
      
 0.656
NSP_26250
Putative RuBisCo chaperonin RbcX; Nsp26250; ORF_ID:nsp26250.
  
     0.652
pyrE
Orotidine 5'-phosphate decarboxylase / Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
    
   0.650
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
   0.650
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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