STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_18860Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Nsp18860; ORF_ID:nsp18860. (436 aa)    
Predicted Functional Partners:
NSP_18870
WD-40 repeat protein; Nsp18870; ORF_ID:nsp18870.
     0.887
NSP_27190
Chitinase; Nsp27190; ORF_ID:nsp27190; Belongs to the glycosyl hydrolase 18 family.
     
 0.734
NSP_20340
ATP/ADP translocase; Nsp20340; ORF_ID:nsp20340.
  
     0.657
NSP_38140
Hypothetical protein; Nsp38140; ORF_ID:nsp38140.
  
     0.652
NSP_13160
Hypothetical protein; Nsp13160; ORF_ID:nsp13160.
  
     0.624
NSP_25210
TPR repeat protein; Nsp25210; ORF_ID:nsp25210.
  
     0.609
NSP_18850
Hypothetical protein; Nsp18850; ORF_ID:nsp18850.
       0.596
NSP_10320
Hypothetical protein; Nsp10320; ORF_ID:nsp10320.
  
  
  0.595
NSP_33910
Hypothetical protein; Nsp33910; ORF_ID:nsp33910.
  
     0.563
NSP_22100
Heterocyst differentiation protein; Nsp22100; ORF_ID:nsp22100.
  
     0.555
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.