STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_18920Hypothetical protein; Nsp18920; ORF_ID:nsp18920. (391 aa)    
Predicted Functional Partners:
NSP_17470
Hypothetical protein, contains HAS barrel docking domain and DUF87 domain; Nsp17470; ORF_ID:nsp17470.
 
 
 
 0.951
NSP_13080
Hypothetical protein; Nsp13080; ORF_ID:nsp13080.
 
     0.796
NSP_17130
RcaG protein; Nsp17130; ORF_ID:nsp17130.
   
 
 0.795
NSP_5630
Hypothetical protein; Nsp5630; ORF_ID:nsp5630.
   
 
 0.793
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.786
NSP_30960
Exonuclease SbcC; Nsp30960; ORF_ID:nsp30960.
 
     0.780
NSP_10210
Hypothetical protein; Nsp10210; ORF_ID:nsp10210.
  
     0.744
NSP_18740
N-acetylmuramoyl-L-alanine amidase; Nsp18740; ORF_ID:nsp18740.
  
     0.625
NSP_590
Hypothetical protein; Nsp590; ORF_ID:nsp590.
  
     0.611
NSP_21980
Hypothetical protein; Nsp21980; ORF_ID:nsp21980.
  
     0.599
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.