STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_19100Ferric iron ABC transporter, iron-binding protein; Nsp19100; ORF_ID:nsp19100. (349 aa)    
Predicted Functional Partners:
NSP_19120
Ferric iron ABC transporter, permease protein; Nsp19120; ORF_ID:nsp19120.
 
 0.994
NSP_19130
Iron(III)-transport ATP-binding protein; Nsp19130; ORF_ID:nsp19130; Belongs to the ABC transporter superfamily.
 
 
 0.973
NSP_12170
Molybdenum transport system permease protein ModB / Molybdenum transport ATP-binding protein ModC; Nsp12170; ORF_ID:nsp12170.
    
  0.789
NSP_11140
Hypothetical protein; Nsp11140; ORF_ID:nsp11140.
    
   0.711
NSP_11910
TonB-dependent receptor; Nsp11910; ORF_ID:nsp11910; Outer membrane receptor for ferrienterochelin and colicins.
   
  
 0.710
NSP_11930
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB; Nsp11930; ORF_ID:nsp11930.
   
  
 0.690
NSP_11960
ABC-type Fe3+-siderophore transport system, ATPase component; Nsp11960; ORF_ID:nsp11960.
   
  
 0.658
NSP_27490
Ferric hydroxamate ABC transporter, ATP-binding protein FhuC; Nsp27490; ORF_ID:nsp27490.
   
  
 0.658
NSP_27510
Ferric hydroxamate ABC transporter, permease component FhuB; Nsp27510; ORF_ID:nsp27510; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
  
 0.632
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.628
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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